diff --git a/pkg/apis/provisioning/v0alpha1/types.go b/pkg/apis/provisioning/v0alpha1/types.go
index 7583af30dc1..5b5936d568a 100644
--- a/pkg/apis/provisioning/v0alpha1/types.go
+++ b/pkg/apis/provisioning/v0alpha1/types.go
@@ -207,6 +207,7 @@ type WebhookStatus struct {
 	ID               int64    `json:"id,omitempty"`
 	URL              string   `json:"url,omitempty"`
 	Secret           string   `json:"secret,omitempty"`
+	EncryptedSecret  []byte   `json:"encryptedSecret,omitempty"`
 	SubscribedEvents []string `json:"subscribedEvents,omitempty"`
 }
 
diff --git a/pkg/apis/provisioning/v0alpha1/zz_generated.deepcopy.go b/pkg/apis/provisioning/v0alpha1/zz_generated.deepcopy.go
index a31190ecb79..fefbc6ea297 100644
--- a/pkg/apis/provisioning/v0alpha1/zz_generated.deepcopy.go
+++ b/pkg/apis/provisioning/v0alpha1/zz_generated.deepcopy.go
@@ -857,6 +857,11 @@ func (in *WebhookResponse) DeepCopyObject() runtime.Object {
 // DeepCopyInto is an autogenerated deepcopy function, copying the receiver, writing into out. in must be non-nil.
 func (in *WebhookStatus) DeepCopyInto(out *WebhookStatus) {
 	*out = *in
+	if in.EncryptedSecret != nil {
+		in, out := &in.EncryptedSecret, &out.EncryptedSecret
+		*out = make([]byte, len(*in))
+		copy(*out, *in)
+	}
 	if in.SubscribedEvents != nil {
 		in, out := &in.SubscribedEvents, &out.SubscribedEvents
 		*out = make([]string, len(*in))
diff --git a/pkg/apis/provisioning/v0alpha1/zz_generated.openapi.go b/pkg/apis/provisioning/v0alpha1/zz_generated.openapi.go
index fd73980698f..a53c4380bd0 100644
--- a/pkg/apis/provisioning/v0alpha1/zz_generated.openapi.go
+++ b/pkg/apis/provisioning/v0alpha1/zz_generated.openapi.go
@@ -1909,6 +1909,12 @@ func schema_pkg_apis_provisioning_v0alpha1_WebhookStatus(ref common.ReferenceCal
 							Format: "",
 						},
 					},
+					"encryptedSecret": {
+						SchemaProps: spec.SchemaProps{
+							Type:   []string{"string"},
+							Format: "byte",
+						},
+					},
 					"subscribedEvents": {
 						SchemaProps: spec.SchemaProps{
 							Type: []string{"array"},
diff --git a/pkg/generated/applyconfiguration/provisioning/v0alpha1/webhookstatus.go b/pkg/generated/applyconfiguration/provisioning/v0alpha1/webhookstatus.go
index e42f7b9c134..d550e4fc753 100644
--- a/pkg/generated/applyconfiguration/provisioning/v0alpha1/webhookstatus.go
+++ b/pkg/generated/applyconfiguration/provisioning/v0alpha1/webhookstatus.go
@@ -10,6 +10,7 @@ type WebhookStatusApplyConfiguration struct {
 	ID               *int64   `json:"id,omitempty"`
 	URL              *string  `json:"url,omitempty"`
 	Secret           *string  `json:"secret,omitempty"`
+	EncryptedSecret  []byte   `json:"encryptedSecret,omitempty"`
 	SubscribedEvents []string `json:"subscribedEvents,omitempty"`
 }
 
@@ -43,6 +44,16 @@ func (b *WebhookStatusApplyConfiguration) WithSecret(value string) *WebhookStatu
 	return b
 }
 
+// WithEncryptedSecret adds the given value to the EncryptedSecret field in the declarative configuration
+// and returns the receiver, so that objects can be build by chaining "With" function invocations.
+// If called multiple times, values provided by each call will be appended to the EncryptedSecret field.
+func (b *WebhookStatusApplyConfiguration) WithEncryptedSecret(values ...byte) *WebhookStatusApplyConfiguration {
+	for i := range values {
+		b.EncryptedSecret = append(b.EncryptedSecret, values[i])
+	}
+	return b
+}
+
 // WithSubscribedEvents adds the given value to the SubscribedEvents field in the declarative configuration
 // and returns the receiver, so that objects can be build by chaining "With" function invocations.
 // If called multiple times, values provided by each call will be appended to the SubscribedEvents field.
diff --git a/pkg/registry/apis/provisioning/register.go b/pkg/registry/apis/provisioning/register.go
index 07b8cafbe79..a09100cf4c1 100644
--- a/pkg/registry/apis/provisioning/register.go
+++ b/pkg/registry/apis/provisioning/register.go
@@ -804,5 +804,14 @@ func (b *APIBuilder) encryptSecrets(ctx context.Context, repo *provisioning.Repo
 		}
 		repo.Spec.GitHub.Token = ""
 	}
+
+	if repo.Status.Webhook != nil &&
+		repo.Status.Webhook.Secret != "" {
+		repo.Status.Webhook.EncryptedSecret, err = b.secrets.Encrypt(ctx, []byte(repo.Status.Webhook.Secret))
+		if err != nil {
+			return err
+		}
+		repo.Status.Webhook.Secret = ""
+	}
 	return nil
 }
diff --git a/pkg/registry/apis/provisioning/repository/github.go b/pkg/registry/apis/provisioning/repository/github.go
index 38392403c0d..3b777aa46ed 100644
--- a/pkg/registry/apis/provisioning/repository/github.go
+++ b/pkg/registry/apis/provisioning/repository/github.go
@@ -525,7 +525,12 @@ func (r *githubRepository) Webhook(ctx context.Context, req *http.Request) (*pro
 		return nil, fmt.Errorf("unexpected webhook request")
 	}
 
-	payload, err := github.ValidatePayload(req, []byte(r.config.Status.Webhook.Secret))
+	secret, err := r.secrets.Decrypt(ctx, r.config.Status.Webhook.EncryptedSecret)
+	if err != nil {
+		return nil, fmt.Errorf("failed to decrypt secret: %w", err)
+	}
+
+	payload, err := github.ValidatePayload(req, secret)
 	if err != nil {
 		return nil, apierrors.NewUnauthorized("invalid signature")
 	}
diff --git a/pkg/tests/apis/openapi_snapshots/provisioning.grafana.app-v0alpha1.json b/pkg/tests/apis/openapi_snapshots/provisioning.grafana.app-v0alpha1.json
index e42bcfce665..a3f821512cc 100644
--- a/pkg/tests/apis/openapi_snapshots/provisioning.grafana.app-v0alpha1.json
+++ b/pkg/tests/apis/openapi_snapshots/provisioning.grafana.app-v0alpha1.json
@@ -4007,6 +4007,10 @@
       "com.github.grafana.grafana.pkg.apis.provisioning.v0alpha1.WebhookStatus": {
         "type": "object",
         "properties": {
+          "encryptedSecret": {
+            "type": "string",
+            "format": "byte"
+          },
           "id": {
             "type": "integer",
             "format": "int64"
diff --git a/public/app/features/provisioning/api/endpoints.gen.ts b/public/app/features/provisioning/api/endpoints.gen.ts
index db71cc177eb..af3482a40ed 100644
--- a/public/app/features/provisioning/api/endpoints.gen.ts
+++ b/public/app/features/provisioning/api/endpoints.gen.ts
@@ -829,6 +829,7 @@ export type SyncStatus = {
   state: 'error' | 'pending' | 'success' | 'working';
 };
 export type WebhookStatus = {
+  encryptedSecret?: string;
   id?: number;
   secret?: string;
   subscribedEvents?: string[];